Sirano Dhe-Paganon: search on Z-Library

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1

Discovery and structural analysis of Eph receptor tyrosine kinase inhibitors

Yongmun Choi, Farisa Syeda, John R. Walker, Patrick J. Finerty Jr., Dominic Cuerrier, Amy Wojciechowski, Qingsong Liu, Sirano Dhe-Paganon, Nathanael S. Gray

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2009

Language:

english

File:

PDF, 307 KB

english, 2009

2

Solution NMR structure of the HLTF HIRAN domain: a conserved module in SWI2/SNF2 DNA damage tolerance proteins

Korzhnev, Dmitry M., Neculai, Dante, Dhe-Paganon, Sirano, Arrowsmith, Cheryl H., Bezsonova, Irina

Journal:

Journal of Biomolecular NMR

Year:

2016

Language:

english

File:

PDF, 4.05 MB

english, 2016

3

Crystal Structure of the Pleckstrin Homology-Phosphotyrosine Binding (PH-PTB) Targeting Region of Insulin Receptor Substrate 1

Sirano Dhe-Paganon, Elizabeth A. Ottinger, Robert T. Nolte, Michael J. Eck and Steven E. Shoelson

Journal:

Proceedings of the National Academy of Sciences

Year:

1999

Language:

english

File:

PDF, 1.36 MB

english, 1999

4

Fold of the conserved DTC domain in deltex proteins

Josiah Obiero, John R. Walker, Sirano Dhe-Paganon

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2012

Language:

english

File:

PDF, 1.10 MB

english, 2012

5

Autoregulation by the Juxtamembrane Region of the Human Ephrin Receptor Tyrosine Kinase A3 (EphA3)

Tara L. Davis, John R. Walker, Peter Loppnau, Christine Butler-Cole, Abdellah Allali-Hassani, Sirano Dhe-Paganon

Journal:

Year:

2008

Language:

english

File:

PDF, 2.66 MB

english, 2008

6

Degradation of the BAF Complex Factor BRD9 by Heterobifunctional Ligands

Remillard, David, Buckley, Dennis L., Paulk, Joshiawa, Brien, Gerard L., Sonnett, Matthew, Seo, Hyuk-Soo, Dastierdi, Shiva, Wühr, Martin, Dhe-Paganon, Sirano, Armstrong, Scott A., Bradner, James E.

Journal:

Angewandte Chemie

Year:

2017

Language:

english

File:

PDF, 3.50 MB

english, 2017

7

Structure-reactivity correlations for reactions of substituted phenolate anions with acetate and formate esters

Stefanidis, Dimitrios, Cho, Sayeon, Dhe-Paganon, Sirano, Jencks, William P.

Journal:

Journal of the American Chemical Society

Year:

1993

Language:

english

File:

PDF, 886 KB

english, 1993

8

Structural recognition of an optimized substrate for the ephrin family of receptor tyrosine kinases

Tara L. Davis, John R. Walker, Abdellah Allali-Hassani, Sirlester A. Parker, Benjamin E. Turk, Sirano Dhe-Paganon

Journal:

Year:

2009

Language:

english

File:

PDF, 885 KB

english, 2009

9

Structure of human dipeptidyl peptidase 10 (DPPY): a modulator of neuronal Kv4 channels

Bezerra, Gustavo Arruda, Dobrovetsky, Elena, Seitova, Alma, Fedosyuk, Sofiya, Dhe-Paganon, Sirano, Gruber, Karl

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 1.44 MB

english, 2015

10

Diabetes Mutations Delineate an Atypical POU Domain in HNF-1α

Young-In Chi, J.Daniel Frantz, Byung-Chul Oh, Lone Hansen, Sirano Dhe-Paganon, Steven E. Shoelson

Journal:

Year:

2002

Language:

english

File:

PDF, 654 KB

english, 2002

11

Dual Inhibition of TAF1 and BET Bromodomains from the BI-2536 Kinase Inhibitor Scaffold

Remillard, David, Buckley, Dennis L., Seo, Hyuk-Soo, Ferguson, Fleur M., Dhe-Paganon, Sirano, Bradner, James E., Gray, Nathanael S.

Journal:

ACS Medicinal Chemistry Letters

Year:

2019

Language:

english

File:

PDF, 12.23 MB

english, 2019

12

Identification of NAE Inhibitors Exhibiting Potent Activity in Leukemia Cells: Exploring the Structural Determinants of NAE Specificity

Lukkarila, Julie L., da Silva, Sara R., Ali, Mohsin, Shahani, Vijay M., Xu, G. Wei, Berman, Judd, Roughton, Andrew, Dhe-Paganon, Sirano, Schimmer, Aaron D., Gunning, Patrick T.

Journal:

ACS Medicinal Chemistry Letters

Year:

2011

Language:

english

File:

PDF, 4.88 MB

english, 2011

13

Structure and Function of the PLAA/Ufd3-p97/Cdc48 Complex

Qiu, Liyan, Pashkova, Natasha, Walker, John R., Winistorfer, Stanley, Allali-Hassani, Abdellah, Akutsu, Masato, Piper, Robert, Dhe-Paganon, Sirano

Journal:

Journal of Biological Chemistry

Year:

2010

Language:

english

File:

PDF, 4.00 MB

english, 2010

14

Human HLTF mediates postreplication repair by its HIRAN domain-dependent replication fork remodelling

Achar, Yathish Jagadheesh, Balogh, David, Neculai, Dante, Juhasz, Szilvia, Morocz, Monika, Gali, Himabindu, Dhe-Paganon, Sirano, Venclovas, Česlovas, Haracska, Lajos

Journal:

Nucleic Acids Research

Year:

2015

Language:

english

File:

PDF, 5.23 MB

english, 2015

15

A centrifugation-free high-throughput protein purification system using in-line microfluidization

Denis Alenkin, Laila Yermekbayeva, Shariq Mujib, Anders Vesterberg, Elena Newman, Ken Yamazaki, Doug Cossar, Sirano Dhe-Paganon

Journal:

Protein Expression and Purification

Year:

2011

Language:

english

File:

PDF, 669 KB

english, 2011

16

Site-Selective Monitoring of the Interaction of the SRA Domain of UHRF1 with Target DNA Sequences Labeled with 2-Aminopurine

Greiner, Vanille J., Kovalenko, Lesia, Humbert, Nicolas, Richert, Ludovic, Birck, Catherine, Ruff, Marc, Zaporozhets, Olga A., Dhe-Paganon, Sirano, Bronner, Christian, Mély, Yves

Journal:

Year:

2015

Language:

english

File:

PDF, 607 KB

english, 2015

17

The crystal structure of human WD40 repeat-containing peptidylprolyl isomerase (PPWD1)

Tara L. Davis, John R. Walker, Hui Ouyang, Farrell MacKenzie, Christine Butler-Cole, Elena M. Newman, Elan Z. Eisenmesser, Sirano Dhe-Paganon

Journal:

Year:

2008

Language:

english

File:

PDF, 1009 KB

english, 2008

18

A phenylalanine zipper mediates APS dimerization

Dhe-Paganon, Sirano, Werner, Eric D, Nishi, Masahiro, Hansen, Lone, Chi, Young-In, Shoelson, Steven E

Journal:

Nature Structural and Molecular Biology

Year:

2004

Language:

english

File:

PDF, 648 KB

english, 2004

19

Structural insights into the inhibited states of the Mer receptor tyrosine kinase

Xudong Huang, Patrick Finerty Jr., John R. Walker, Christine Butler-Cole, Masoud Vedadi, Matthieu Schapira, Sirlester A. Parker, Benjamin E. Turk, Debra A. Thompson, Sirano Dhe-Paganon

Journal:

Journal of Structural Biology

Year:

2009

Language:

english

File:

PDF, 1.60 MB

english, 2009

20

Mechanism of Mevalonate Pyrophosphate Decarboxylase: Evidence for a Carbocationic Transition State

Dhe-Paganon, Sirano, Magrath, Joe, Abeles, Robert H.

Journal:

Year:

1994

Language:

english

File:

PDF, 965 KB

english, 1994

21

UHRF1 Links the Histone Code and DNA Methylation to Ensure Faithful Epigenetic Memory Inheritance

Bronner, Christian, Fuhrmann, Guy, Chédin, Frédéric L, Macaluso, Marcella, Dhe-Paganon, Sirano

Journal:

Genetics & Epigenetics

Year:

2009

Language:

english

File:

PDF, 1.35 MB

english, 2009

22

Two ZnF-UBP Domains in Isopeptidase T (USP5)

Avvakumov, George V., Walker, John R., Xue, Sheng, Allali-Hassani, Abdellah, Asinas, Abdalin, Nair, Usha B., Fang, Xianyang, Zuo, Xiaobing, Wang, Yun-Xing, Wilkinson, Keith D., Dhe-Paganon, Sirano

Journal:

Year:

2012

Language:

english

File:

PDF, 4.56 MB

english, 2012

23

Uncovering the Molecular Basis for the Clinical N642H Mutation in STAT5B Using Atomistic Molecular Simulations

Meneksedag-Erol, Deniz, de Araujo, Elvin D., Erdogan, Fettah, Seo, Hyuk-Soo, Dhe-Paganon, Sirano, Gunning, Patrick T., Rauscher, Sarah

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 70 KB

english, 2019

24

WITHDRAWN: Epigallocatechin-3-gallate up-regulates tumor suppressor gene expression via a reactive oxygen species-dependent down-regulation of UHRF1

Achour, Mayada, Mousli, Marc, Alhosin, Mahmoud, Ibrahim, Abdulkhaleg, Peluso, Jean, Muller, Christian D., Schini-Kerth, Valérie B., Hamiche, Ali, Dhe-Paganon, Sirano, Christian Bronner,

Journal:

Biochemical and Biophysical Research Communications

Year:

2012

Language:

english

File:

PDF, 27 KB

english, 2012

25

Design and characterization of bivalent BET inhibitors

Tanaka, Minoru, Roberts, Justin M, Seo, Hyuk-Soo, Souza, Amanda, Paulk, Joshiawa, Scott, Thomas G, DeAngelo, Stephen L, Dhe-Paganon, Sirano, Bradner, James E

Journal:

Nature Chemical Biology

Year:

2016

Language:

english

File:

PDF, 1.15 MB

english, 2016

26

Development of Fluorescent Substrates and Assays for the Key Autophagy-Related Cysteine Protease Enzyme, ATG4B

Nguyen, Thanh G., Honson, Nicolette S., Arns, Steven, Davis, Tara L., Dhe-Paganon, Sirano, Kovacic, Suzana, Kumar, Nag S., Pfeifer, Tom A., Young, Robert N.

Journal:

Assay and Drug Development Technologies

Year:

2014

Language:

english

File:

PDF, 703 KB

english, 2014

27

Structure of human protein kinase C eta (PKCη) C2 domain and identification of phosphorylation sites

Dene R. Littler, John R. Walker, Yi-Min She, Patrick J. Finerty Jr., Elena M. Newman, Sirano Dhe-Paganon

Journal:

Biochemical and Biophysical Research Communications

Year:

2006

Language:

english

File:

PDF, 1.92 MB

english, 2006

28

Architecture of Eph receptor clusters

Juha P. Himanen, Laila Yermekbayeva, Peter W. Janes, John R. Walker, Kai Xu, Lakmali Atapattu, Kanagalaghatta R. Rajashankar, Anneloes Mensinga, Martin Lackmann, Dimitar B. Nikolov, Sirano Dhe-Paganon

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.83 MB

english, 2010

29

Degradation of the BAF Complex Factor BRD9 by Heterobifunctional Ligands

Remillard, David, Buckley, Dennis L., Paulk, Joshiawa, Brien, Gerard L., Sonnett, Matthew, Seo, Hyuk-Soo, Dastierdi, Shiva, Wühr, Martin, Dhe-Paganon, Sirano, Armstrong, Scott A., Bradner, James E.

Journal:

Angewandte Chemie International Edition

Year:

2017

Language:

english

File:

PDF, 3.59 MB

english, 2017

30

Ring1B Contains a Ubiquitin-Like Docking Module for Interaction with Cbx Proteins ,

Bezsonova, Irina, Walker, John R., Bacik, John P., Duan, Shili, Dhe-Paganon, Sirano, Arrowsmith, Cheryl H.

Journal:

Year:

2009

Language:

english

File:

PDF, 2.93 MB

english, 2009

31

Crystal Structures of Anti-apoptotic BFL-1 and Its Complex with a Covalent Stapled Peptide Inhibitor

Harvey, Edward P., Seo, Hyuk-Soo, Guerra, Rachel M., Bird, Gregory H., Dhe-Paganon, Sirano, Walensky, Loren D.

Journal:

Year:

2017

Language:

english

File:

PDF, 2.72 MB

english, 2017

32

Identification of a Structural Determinant for Selective Targeting of HDMX

Ben-Nun, Yael, Seo, Hyuk-Soo, Harvey, Edward P., Hauseman, Zachary J., Wales, Thomas E., Newman, Catherine E., Cathcart, Ann M., Engen, John R., Dhe-Paganon, Sirano, Walensky, Loren D.

Journal:

Year:

2020

File:

PDF, 2.93 MB

2020

33

The Crystal Structures of Human Calpains 1 and 9 Imply Diverse Mechanisms of Action and Auto-inhibition

Tara L. Davis, John R. Walker, Patrick J. Finerty Jr, Farrell Mackenzie, Elena M. Newman, Sirano Dhe-Paganon

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.25 MB

english, 2007

34

FKBP Family Proteins: Immunophilins with Versatile Biological Functions

Kang, Cong Bao, Hong, Ye, Dhe-Paganon, Sirano, Yoon, Ho Sup

Journal:

Year:

2008

Language:

english

File:

PDF, 340 KB

english, 2008

35

Basic Tilted Helix Bundle – A new protein fold in human FKBP25/FKBP3 and HectD1

Helander, Sara, Montecchio, Meri, Lemak, Alexander, Farès, Christophe, Almlöf, Jonas, Li, Yanjun, Yee, Adelinda, Arrowsmith, Cheryl H., Dhe-Paganon, Sirano, Sunnerhagen, Maria

Journal:

Biochemical and Biophysical Research Communications

Year:

2014

Language:

english

File:

PDF, 1.54 MB

english, 2014

36

Leveraging Gas-Phase Fragmentation Pathways for Improved Identification and Selective Detection of Targets Modified by Covalent Probes

Ficarro, Scott B., Browne, Christopher M., Card, Joseph D., Alexander, William M., Zhang, Tinghu, Park, Eunyoung, McNally, Randall, Dhe-Paganon, Sirano, Seo, Hyuk-Soo, Lamberto, Ilaria, Eck, Michael J

Journal:

Analytical Chemistry

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

37

Structure of the IRS-1 PTB Domain Bound to the Juxtamembrane Region of the Insulin Receptor

Michael J. Eck, Sirano Dhe-Paganon, Thomas Trüb, Robert T. Nolte, Steven E. Shoelson

Journal:

Year:

1996

Language:

english

File:

PDF, 2.00 MB

english, 1996

38

Cancer Activating Mutations in STAT5B: Elucidating the Impact on Protein Structure and Dynamics using Atomistic Molecular Simulations

Meneksedag-Erol, Deniz, de Araujo, Elvin D., Erdogan, Fettah, Seo, Hyuk-Soo, Dhe-Paganon, Sirano, Gunning, Patrick T., Rauscher, Sarah

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 49 KB

2020

39

Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1

Avvakumov, George V., Walker, John R., Xue, Sheng, Li, Yanjun, Duan, Shili, Bronner, Christian, Arrowsmith, Cheryl H., Dhe-Paganon, Sirano

Journal:

Year:

2008

Language:

english

File:

PDF, 708 KB

english, 2008

40

Role of specific acidic lipids on the reconstitution of sodium-dependent amino acid transport in proteoliposomes derived from Ehrlich cell plasma membranes

Lin, Guorong, McCormick, John I., Dhe-Paganon, Sirano, Silvius, John R., Johnstone, Rose M.

Journal:

Year:

1990

Language:

english

File:

PDF, 884 KB

english, 1990

41

Structural Characterization of Interaction between Human Ubiquitin Specific Protease 7 and Immediate Early Protein ICP0 of Herpes Simplex Virus-1

Pozhidaeva, Alexandra K., Mohni, Kareem N., Dhe-Paganon, Sirano, Arrowsmith, Cheryl H., Weller, Sandra K., Korzhnev, Dmitry M., Bezsonova, Irina

Journal:

Journal of Biological Chemistry

Year:

2015

Language:

english

File:

PDF, 6.53 MB

english, 2015

42

Functional role of the flexible N-terminal extension of FKBP38 in catalysis

Kang, CongBao, Ye, Hong, Chia, Joel, Choi, Bo-Hwa, Dhe-Paganon, Sirano, Simon, Bernd, Schütz, Ulrike, Sattler, Michael, Yoon, Ho Sup

Journal:

Scientific Reports

Year:

2013

Language:

english

File:

PDF, 1.97 MB

english, 2013

43

Structural Implications of STAT3 and STAT5 SH2 Domain Mutations

de Araujo, Elvin D., Orlova, Anna, Neubauer, Heidi A., Bajusz, Dávid, Seo, Hyuk-Soo, Dhe-Paganon, Sirano, Keserű, György M., Moriggl, Richard, Gunning, Patrick T.

Journal:

Year:

2019

Language:

english

File:

PDF, 989 KB

english, 2019

44

Structural Implications of STAT3 and STAT5 SH2 Domain Mutations

de Araujo, Elvin D., Orlova, Anna, Neubauer, Heidi A., Bajusz, Dávid, Seo, Hyuk-Soo, Dhe-Paganon, Sirano, Keserű, György M., Moriggl, Richard, Gunning, Patrick T.

Journal:

Year:

2019

File:

PDF, 989 KB

2019

45

Distinguishing between calpain heterodimerization and homodimerization

Ravikiran Ravulapalli, Robert L. Campbell, Sherry Y. Gauthier, Sirano Dhe-Paganon, Peter L. Davies

Journal:

Year:

2009

Language:

english

File:

PDF, 412 KB

english, 2009

46

Structural determination of the phosphorylation domain of the ryanodine receptor

Parveen Sharma, Noboru Ishiyama, Usha Nair, Wenping Li, Aiping Dong, Tetsuaki Miyake, Aaron Wilson, Tim Ryan, David H. MacLennan, Thomas Kislinger, Mitsuhiko Ikura, Sirano Dhe-Paganon, Anthony O. Gram

Journal:

Year:

2012

Language:

english

File:

PDF, 662 KB

english, 2012

47

Epigallocatechin-3-gallate up-regulates tumor suppressor gene expression via a reactive oxygen species-dependent down-regulation of UHRF1

Achour, Mayada, Mousli, Marc, Alhosin, Mahmoud, Ibrahim, Abdulkhaleg, Peluso, Jean, Muller, Christian D., Schini-Kerth, Valérie B., Hamiche, Ali, Dhe-Paganon, Sirano, Bronner, Christian

Journal:

Biochemical and Biophysical Research Communications

Year:

2013

Language:

english

File:

PDF, 425 KB

english, 2013

48

Uncovering the Molecular Basis for the Clinical N642H Mutation in STAT5B Using Atomistic Molecular Simulations

Meneksedag-Erol, Deniz, de Araujo, Elvin D., Erdogan, Fettah, Seo, Hyuk-Soo, Dhe-Paganon, Sirano, Gunning, Patrick T., Rauscher, Sarah

Journal:

Biophysical Journal

Year:

2019

File:

PDF, 70 KB

2019

49

Zn-binding AZUL domain of human ubiquitin protein ligase Ube3A

Alexander Lemak, Adelinda Yee, Irina Bezsonova, Sirano Dhe-Paganon, Cheryl H. Arrowsmith

Journal:

Journal of Biomolecular NMR

Year:

2011

Language:

english

File:

PDF, 1.81 MB

english, 2011

50

Mass Spectrometry Following Mild Enzymatic Digestion Reveals Phosphorylation of Recombinant Proteins in Escherichia coli Through Mechanisms Involving Direct Nucleotide Binding

She, Yi-Min, Xu, Xiaohui, Yakunin, Alexander F., Dhe-Paganon, Sirano, Donald, Lynda J., Standing, Kenneth G., Lee, Daniel C., Jia, Zongchao, Cyr, Terry D.

Journal:

Journal of Proteome Research

Year:

2010

Language:

english

File:

PDF, 3.09 MB

english, 2010

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